Detalhe da pesquisa
1.
PLSDA-batch: a multivariate framework to correct for batch effects in microbiome data.
Brief Bioinform;
24(2)2023 03 19.
Artigo
em Inglês
| MEDLINE
| ID: mdl-36653900
2.
Sincast: a computational framework to predict cell identities in single-cell transcriptomes using bulk atlases as references.
Brief Bioinform;
23(3)2022 05 13.
Artigo
em Inglês
| MEDLINE
| ID: mdl-35362513
3.
Statistical challenges in longitudinal microbiome data analysis.
Brief Bioinform;
23(4)2022 07 18.
Artigo
em Inglês
| MEDLINE
| ID: mdl-35830875
4.
A field guide to cultivating computational biology.
PLoS Biol;
19(10): e3001419, 2021 10.
Artigo
em Inglês
| MEDLINE
| ID: mdl-34618807
5.
Interpretation of network-based integration from multi-omics longitudinal data.
Nucleic Acids Res;
50(5): e27, 2022 03 21.
Artigo
em Inglês
| MEDLINE
| ID: mdl-34883510
6.
A multi-modal data harmonisation approach for discovery of COVID-19 drug targets.
Brief Bioinform;
22(6)2021 11 05.
Artigo
em Inglês
| MEDLINE
| ID: mdl-34036326
7.
timeOmics: an R package for longitudinal multi-omics data integration.
Bioinformatics;
38(2): 577-579, 2022 01 03.
Artigo
em Inglês
| MEDLINE
| ID: mdl-34554215
8.
Epistatic interactions between killer immunoglobulin-like receptors and human leukocyte antigen ligands are associated with ankylosing spondylitis.
PLoS Genet;
16(8): e1008906, 2020 08.
Artigo
em Inglês
| MEDLINE
| ID: mdl-32804949
9.
Benchmarking single cell RNA-sequencing analysis pipelines using mixture control experiments.
Nat Methods;
16(6): 479-487, 2019 06.
Artigo
em Inglês
| MEDLINE
| ID: mdl-31133762
10.
Streptococcus species enriched in the oral cavity of patients with RA are a source of peptidoglycan-polysaccharide polymers that can induce arthritis in mice.
Ann Rheum Dis;
80(5): 573-581, 2021 05.
Artigo
em Inglês
| MEDLINE
| ID: mdl-33397732
11.
A simple, scalable approach to building a cross-platform transcriptome atlas.
PLoS Comput Biol;
16(9): e1008219, 2020 09.
Artigo
em Inglês
| MEDLINE
| ID: mdl-32986694
12.
DIABLO: an integrative approach for identifying key molecular drivers from multi-omics assays.
Bioinformatics;
35(17): 3055-3062, 2019 09 01.
Artigo
em Inglês
| MEDLINE
| ID: mdl-30657866
13.
Genome-wide characterization of the routes to pluripotency.
Nature;
516(7530): 198-206, 2014 Dec 11.
Artigo
em Inglês
| MEDLINE
| ID: mdl-25503233
14.
IL-23 favours outgrowth of spondyloarthritis-associated pathobionts and suppresses host support for homeostatic microbiota.
Ann Rheum Dis;
78(4): 494-503, 2019 04.
Artigo
em Inglês
| MEDLINE
| ID: mdl-30700427
15.
An improved clinical model to predict stimulated C-peptide in children with recent-onset type 1 diabetes.
Pediatr Diabetes;
20(2): 166-171, 2019 03.
Artigo
em Inglês
| MEDLINE
| ID: mdl-30556344
16.
PhosphoPICK-SNP: quantifying the effect of amino acid variants on protein phosphorylation.
Bioinformatics;
33(12): 1773-1781, 2017 Jun 15.
Artigo
em Inglês
| MEDLINE
| ID: mdl-28186228
17.
Human hepatocellular carcinomas with a periportal phenotype have the lowest potential for early recurrence after curative resection.
Hepatology;
66(5): 1502-1518, 2017 11.
Artigo
em Inglês
| MEDLINE
| ID: mdl-28498607
18.
mixOmics: An R package for 'omics feature selection and multiple data integration.
PLoS Comput Biol;
13(11): e1005752, 2017 Nov.
Artigo
em Inglês
| MEDLINE
| ID: mdl-29099853
19.
Multivariate Analysis of Multiple Datasets: a Practical Guide for Chemical Ecology.
J Chem Ecol;
44(3): 215-234, 2018 Mar.
Artigo
em Inglês
| MEDLINE
| ID: mdl-29479643
20.
MINT: a multivariate integrative method to identify reproducible molecular signatures across independent experiments and platforms.
BMC Bioinformatics;
18(1): 128, 2017 Feb 27.
Artigo
em Inglês
| MEDLINE
| ID: mdl-28241739